Revit :: How To Create Room Elevations To Show Furniture / Equipment Layouts

I have a large building project with multiple linked files (building split into blocks plus furniture etc models) with shared co-ordinates. All are working fine except one which happens to be a furniture and equipment model. When sections and/or elevations are placed in either the host or the linked file the views do not corrospond with the cut line of the section or view line of the elevation, for example if I place an elevation within a room the elevation looks as if it has been placed in a different position some metres away. When the files are linked within each other using the shared co-ordinates they place themselves in plan and elevation perfectly. I am trying to create room elevations to show furniture/equipment layouts and this is making it impossible!